Difference between revisions of "User:Cmaw32402"

From REU@MU
Jump to: navigation, search
 
(35 intermediate revisions by the same user not shown)
Line 1: Line 1:
== Project Summary ==
 
The proposed research aims to address the opioid epidemic in the United States by developing predictive algorithms that can assess a patient's risk of developing Opioid Use Disorder, experiencing opioid overdose, or being readmitted to the hospital for opioid-related issues. This will be built through a web application called the SURE app which uses peer mentoring to connect mentors with mentees in its database. The study will also utilize de-identified hospital records from Froedtert Hospital and extract health-related, demographic, psychosocial, and outcome-level data on patients. ChatbotGpt will be used as an AI tool prediction for this project. The objectives of the research are as follows:
 
 
The first aim focuses on determining the specific variables, including health-related data and social determinants, that can be used to assess the risk of OUD development, opioid overdose, and readmission for opioid-related issues. This will involve identifying key data that can predict risk factors for these indicators and understanding the distribution of patients with OUD, overdose, and readmission based on different variables such as urban and rural settings.
 
 
The second aim is to determine the machine learning models that can effectively predict the risk of developing OUD, opioid overdose, and readmission at different time intervals for opioid-related issues.
 
 
The third aim is determining how providers can utilize the risk data obtained from the predictive models to provide overdose prevention intervention in the emergency department setting.
 
 
 
== Goals ==
 
== Goals ==
 
::1. Since this is my first research project, I want to get a general understanding of research including experience with:
 
::1. Since this is my first research project, I want to get a general understanding of research including experience with:
Line 63: Line 54:
 
* Researching/reading articles for project
 
* Researching/reading articles for project
 
* Added articles to bibliography
 
* Added articles to bibliography
 +
 +
 +
== Friday 6/9/2023 ==
 +
*More looking for related research within healthcare/survey/peer mentoring
 +
*Still working on adding to bibliography
  
 
== Monday 6/12/2023 ==
 
== Monday 6/12/2023 ==
 
*Healthcare related research on peer mentoring and how to get good healthcare feedback
 
*Healthcare related research on peer mentoring and how to get good healthcare feedback
 +
 +
== Wednesday 6/14/2023 ==
 +
*Lecture on example presentation
 +
*Meeting with research group
 +
**goal for end of week is to create check in survey for opioid users
 +
**learn C#
 +
 +
==== Opioid Research ====
 +
*[https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6699803/]
 +
**article reviews tools on risk assessment
 +
**"Opioid use disorder risk assessment tools cannot be used in isolation"
 +
**Article includes tool assessment for SUD afflicted denying treatment/disorder (is this audience included in application?)
 +
**Biological, social, and psychological assessment
 +
 +
*[https://www.sciencedirect.com/science/article/pii/S0885392406004416#bib8]
 +
** article contains good sources on opioid risk/addiction assessment, but these are all early 2000s to 90s
 +
***[https://pdf.sciencedirectassets.com/272059/1-s2.0-S0149291800X00811/1-s2.0-S0149291804900574/main.pdf?X-Amz-Security-Token=IQoJb3JpZ2luX2VjEML%2F%2F%2F%2F%2F%2F%2F%2F%2F%2FwEaCXVzLWVhc3QtMSJIMEYCIQCTpSLj3KqUhYtjuxEsmU83Pa7DopJMwCG4GfwQ1%2F9guQIhAJwr8TXciQr9lti%2FYhA5bi3BSvJSIv4ajJOHJtoziJx7KrIFCBoQBRoMMDU5MDAzNTQ2ODY1Igx4B%2BBE7FQky1AgrmoqjwXKvdOtO9V54%2BPSDi0pclfY%2FVwZlWkk%2FUTwElo831k59xo0UfmR%2BW9HHaY7r6ctiHetSLR3%2FPaDl8IfAhICLJp6ZiAEdjv1eaqguNX7SwvnyKxrXWVaP14qo4e4EMwp7KoqZBrWVsNYMtvGeABsyAXpAbjiZAyxSI3mUKeQN0a8FAhXNOYifRzumjQ7B0I%2FS7YgLwdsfxEbe83wah34WyLfn4iUNmJrbwS93iZewXEF4tIe01ZcDbJY0Qxga10g%2BfIMZVYS%2Bz8i%2Bwqvw3sCN3nuguXW4dujvfsTrSbxNcoJzjuDxsaYDHtMxTEx7YHotmGB%2Bh%2FP7Da64RbeBComOIwkx4dwtkxv8Ei2d3WmmdBtUz1mTcxF3KSVVB4j7GZ9w2H5F4f3ah22YactN3uoCAiBiaRdRAtPqIWcFvlpY9ou4bMfRPhXCkU4cMc2hIrAu6BT4JDDQmzi5YSQk7Ev%2B1k5hcPx2edBh4%2BbnzT1uROyYHwViiqpbMXft3QmMSZMFDrXvSNYbdKzse%2Baabco3RC8C6BufqYF%2Bs00vp1Ct6tZ2e2ielKymNzhSrmYN6KA18KgpVltOdKq9PsrEESk3yoyLyDlwoav1mYpBaIH5GUEbkC%2FbSZXVJMZDXuoH07t4fWquyercaJxRPCvz0UKsSF2%2Fst0xNjO7iIELRBt6W6th24RjFKxAamE%2FF5DLebw%2Be2G3X0b0%2FaDEZvjhRjWE%2BPnSuVK4MlswAbi3G5D2MOByHUBfDRkHEpyyoBiOwRWF5MbzfEW4HJyDviz9fNuS3MEFGzilSyctELbRt%2BhyIpmJA8%2FW%2FXPUoNCcI40%2FWs6Mp41tLzcUFRAZ5Fd3%2Bqg6zwzjFG%2FPzo0Bd3CbkC3Tm9CMPrrp6QGOrABsrE1A1PLoAPJOxJOo7%2Bpx1cF6nAFLH7N39E3PR2cb2wZ9263L0KyBfBD7dvxQMirwQrUBJ0Ttf0RVy%2F8cTcrdampLBylsAAgNv01iuRenvQT%2FHcfMjnv76SXH7bUNvm7jaAJPZHbxBOvSRHxi%2B1OLr67a%2F7pfo4FLk7ihBL315pNAjHTrvzNWKIaxb0kdT0kJEFkVhRZ1QASQlJ9ZTUyv79nmn0d5F%2Fzxml3ersX2s0%3D&X-Amz-Algorithm=AWS4-HMAC-SHA256&X-Amz-Date=20230614T183619Z&X-Amz-SignedHeaders=host&X-Amz-Expires=300&X-Amz-Credential=ASIAQ3PHCVTYTTJRSQWL%2F20230614%2Fus-east-1%2Fs3%2Faws4_request&X-Amz-Signature=6938942267421b3b55e70fcd27104e34855def8d5c697de888e157dd889e8773&hash=865b432cfbf7e7efba4d3b0fb248e0d95a68141517971996c515183d3dc47dd4&host=68042c943591013ac2b2430a89b270f6af2c76d8dfd086a07176afe7c76c2c61&pii=S0149291804900574&tid=spdf-bf76565b-02e3-4eea-8bff-0136d6f87a88&sid=95ce45a27621f2485d8b3a764ef0ac836e27gxrqa&type=client&tsoh=d3d3LnNjaWVuY2VkaXJlY3QuY29t&ua=1015520b535600015804&rr=7d74ad9f4fd2e1d3&cc=us]
 +
***[https://pdf.sciencedirectassets.com/271242/1-s2.0-S0885392400X01376/1-s2.0-088539249390154N/main.pdf?X-Amz-Security-Token=IQoJb3JpZ2luX2VjEML%2F%2F%2F%2F%2F%2F%2F%2F%2F%2FwEaCXVzLWVhc3QtMSJHMEUCIByfQtpZsWa8xsP3jcSWLJRo0oYaGW0jrKmjFi4vhIirAiEA82SlM%2BfzzI307FHGD1O9WTl%2BOAjB%2BNkF%2BFLouYT5ZHwqsgUIGxAFGgwwNTkwMDM1NDY4NjUiDNteu28wtt7Jlni0BiqPBQybd1CuZJmAa7cr6BL3wYo3ieh%2FPFY%2BaJgKylS%2BR%2BvlHUx09dobCbeshRedHIFkRCfPGPbznkuJoT%2BKt1uqRxsYkNbq2j6slZjuzAWIUfcv1SvzYFKnEpPspIX1%2FuX1%2FfGlrgN%2BGb4EYBbNAbbhXHdbIqG53s3D2NYeBsjLsyUdSXbFiY4ENSJ0LMSrUAUgETGkdBIUkPrZ6VMnj0KaYIWCD5iTvGRwCiss3VITU7o9Ii5z%2FvuD3SO6qm5bc1s%2BURz1%2BKO4D6T6flQhNarKoAqefNGVzWnK4Ufb9ToZbtYvP8Uajp1A19tDX6bt2OfHL1ef95MZHNvnrBYiOr41sIvuPgBCeOnJOLL348zqYtaw6WY19O5nlujjdArYAZf0JkbRJBM86SZP778apU%2BW8GqD1yhdiWW3xfoRefiVyXJ8rwnkifcvod3NTBBuVYPtkAywOtFBsET066NGcmz1JG2wfYoCqy77rvQOZPqshzr5suP8fFihivwSw%2FdjXW8ASDoH0Ay2hQ2I6%2FWfOBo2ep%2ByVRbhR37wg2ev5SBsS9gMwm%2FNcN2FMcdLiUxy%2BzvvkXomHqKtdHsiyxIB4TeOOCVFTEqvZVdXGix60yzoTQaCUL7zee%2BSo3CgrIKepiUbXZbtIHOLvVIJR7lWOZlTmEKQI%2BZOvIFaKn7dBMng4qETd9HnQPAz5A5eNYRzrIEUsFqLPpyxF1iwxz133dGbE%2BgjxV%2Fnpvd%2Bm3dpESkjeA4JjlpPN00GO%2FleAq7%2F4MsPBL0Iy8FlIw1ieUjOhBSNFjKa8G0LpWE83kg%2B8raPLKW%2BrzfuyseVLuqP5tY6EgLTWCnkYW8eogNnNEPRK6PEbFUVe7up2seaEYYwXCrEUNswxoCopAY6sQFz64Ani%2BISvT2kGNxV3GXD6frPmkIib6%2FtWzbHIuBnjDNYfRL1FyVaOrDUpJt5Bvf5CPwK2gWGtswnL3ZlP3n%2BoYw2EKHLujQcUUAQvG5AbOFGzlNl2exIUKzAw%2FZudQjaLn2Wms0Cd5j1c2IKCBy1067UfVESXQy3SW%2B3s6MGxf3yalz26U0O7Yvz1jHSKRlvcPv3GsVxDFgOgvR3Zo8nyQmhABGBUX7VXHzutaXG8ck%3D&X-Amz-Algorithm=AWS4-HMAC-SHA256&X-Amz-Date=20230614T183744Z&X-Amz-SignedHeaders=host&X-Amz-Expires=300&X-Amz-Credential=ASIAQ3PHCVTYVU4XGOTX%2F20230614%2Fus-east-1%2Fs3%2Faws4_request&X-Amz-Signature=e66782202bf682c03a9347649f7edee65dd2910a4b93108eaebdfa22830e3dff&hash=aeabd9bea21f4be69ffc0205bd1453bae1ec858317c1b50470813dc9b02b8be0&host=68042c943591013ac2b2430a89b270f6af2c76d8dfd086a07176afe7c76c2c61&pii=088539249390154N&tid=spdf-69c1549f-d81f-4cc4-a07a-e5e8e57241b4&sid=95ce45a27621f2485d8b3a764ef0ac836e27gxrqa&type=client&tsoh=d3d3LnNjaWVuY2VkaXJlY3QuY29t&ua=1015520b535600030352&rr=7d74afb00939e1d3&cc=us]
 +
 +
===== Questions: =====
 +
Are users of the app already committed towards fighting their SUD or is the app a first step? What is the specific audience of the App?
 +
What research is considered outdated?
 +
 +
== Thursday 6/15/2023 ==
 +
 +
====Researching articles to create opioid use disorder relapse survey:====
 +
 +
*[https://www.sciencedirect.com/science/article/pii/S2772724622001032]
 +
**Polysubstance use (using other drugs) increases risk of opioid relapse
 +
**"Relapse" is good keyword for research
 +
 +
*[https://www.sciencedirect.com/science/article/pii/S2949875923000784]
 +
**Pandemic led to relapse - isolation as factor
 +
 +
*[https://www.sciencedirect.com/science/article/pii/S0740547221001732]
 +
**medications good for avoiding opioid relapse
 +
 +
 +
*[https://www.sciencedirect.com/science/article/abs/pii/S030646032100099X]
 +
**Socialization and meaningfulness prevent opioid relapse
 +
== Friday 6/16/2023 ==
 +
Research for SUD questionnaire
 +
*Established surveys - can these be used (intended for clinical settings, licensed practioners, and copyrighted)
 +
*[https://health.ri.gov/materialbyothers/OpioidRiskTool.pdf]
 +
*[https://www.mcstap.com/docs/SOAPP-5.pdf]
 +
*[https://onlinelibrary.wiley.com/doi/full/10.1111/ajad.13151]
 +
*[https://journals.lww.com/indianjpsychiatry/Fulltext/2021/63040/Relapse_in_opioid_dependence__Role_of_psychosocial.8.aspx]
 +
*[https://www.frontiersin.org/articles/10.3389/fpubh.2022.1032217/full]
 +
 +
== Monday 6/19/2023 ==
 +
*Watched Django tutorial videos on youtube
 +
*Will start programming next week
 +
 +
== Tuesday 6/20/2023 ==
 +
*Meeting with Sajad on software development for App
 +
**Will be done in django
 +
**SQl Database to store 3 different users - Admin, mentor, mentee
 +
**Create python virtual environment - anaconda
 +
 +
== Wednesday 6/21/2023 ==
 +
*Mentor meeting, group meeting - sharing progress, sharing question research
 +
*Django tutorials
 +
 +
== Thursday 6/22/2023 ==
 +
*Setting up python virtual environment
 +
*Anaconda
 +
*Work on users
 +
 +
== Friday 6/23/2023 ==
 +
*More tutorials/python environment trouble shooting
 +
 +
== Monday 6/26/2023 ==
 +
*Starting to work on presentation
 +
*Entering documents into bibliography
 +
 +
== Tuesday 6/27/2023 ==
 +
*Presentation finish/practice
 +
 +
== Wednesday 6/28/2023 ==
 +
*Presentations
 +
*Mentor meeting progress report
 +
 +
== Friday 6/30/2023 ==
 +
*Setting up github repo to python virtual environment
 +
*More VE troubleshooting
 +
 +
== Tuesday 7/4/2023 ==
 +
*Meeting with graduate student researcher
 +
*Anaconda terminal/vscode fix - launch vscode from anaconda
 +
 +
== Wednesday 7/5/2023 ==
 +
*Coding user package
 +
 +
== Thursday 7/6/2023 ==
 +
*more Coding on user packages
 +
 +
== Friday 7/7/2023 ==
 +
*Initial user package nearly complete
 +
*Bugs with message display
 +
*Login and registration page working
 +
*Need to create two different types of users
 +
 +
== Monday 7/10/2023 ==
 +
*Continuing work on user package
 +
 +
== Tuesday 7/11/2023 ==
 +
*Beginning survey functionality
 +
*Django tutorials
 +
*Meeting with graduate student researcher on webpage
 +
 +
== Wednesday 7/12/2023 ==
 +
*More coding for survey
 +
*Creating template for survey
 +
 +
 +
== Friday 7/14/2023 ==
 +
*Survey coding and testing
 +
*Survey is difficult to implement
 +
 +
 +
== Monday 7/14/2023 ==
 +
*Meeting on survey/webpage
 +
 +
== Tuesday 7/17/2023 ==
 +
*Research on Django webpage
 +
*More webpage coding
 +
 +
== Wednesday 7/18/2023 ==
 +
*Mentor meeting
 +
*Poster presentation
 +
 +
== Thursday 7/19/2023 ==
 +
*Survey coding

Latest revision as of 23:45, 25 July 2023

Goals

1. Since this is my first research project, I want to get a general understanding of research including experience with:
  • How a research project is started and takes shape
  • How to draw upon other research to build your own
  • How to write, discuss, and present research
  • How to effectively work as a team on a project
2. I would like to develop more skills in coding, as I have never done any coding related to web development before.
3. I want to understand how a web application is created and functions.
  • This also includes how C# is used within web development
4. I would meet and connect with members of Marquette computer science department to become more involved.

Milestones

Wednesday 5/31/2023

  • ‎ Lecture on introduction to research and log entries
  • ‎ General introduction to project with mentor - will be focusing on web development of this project as opposed to the AI element
  • ‎Read Summary:
::‎// Summary
  • ‎Reflection on how what can be researched about web development in project context
  • ‎Watching videos to introduce myself to C#

Thursday 6/1/2023

  • Finished reading all preliminary documents in project teams files
  • More C# studying
  • Starting to think about doing a small C# web project just for experience like creating some kind of website

Friday 6/2/2023

  • Small chat with mentor about goals/milestones/summary
  • Worked on goals
  • Worked on milestones
  • Worked on summary
^ These are all still drafts I plan to change these as the project takes form and I learn more about it

Monday 6/5/2023

  • RCR Training

Tuesday 6/6/2023

  • Meeting with Grad student about next steps for research
-Priority research areas
-Finding peer mentor applications
  • exploring research websites

Wednesday 6/7/2023

  • Brylow lecture on presenting/writing research
  • Mentor meeting on what to research - research mainly healthcare applications

Thursday 6/8/2023

  • Researching/reading articles for project
  • Added articles to bibliography


Friday 6/9/2023

  • More looking for related research within healthcare/survey/peer mentoring
  • Still working on adding to bibliography

Monday 6/12/2023

  • Healthcare related research on peer mentoring and how to get good healthcare feedback

Wednesday 6/14/2023

  • Lecture on example presentation
  • Meeting with research group
    • goal for end of week is to create check in survey for opioid users
    • learn C#

Opioid Research

  • [1]
    • article reviews tools on risk assessment
    • "Opioid use disorder risk assessment tools cannot be used in isolation"
    • Article includes tool assessment for SUD afflicted denying treatment/disorder (is this audience included in application?)
    • Biological, social, and psychological assessment
  • [2]
    • article contains good sources on opioid risk/addiction assessment, but these are all early 2000s to 90s
Questions:

Are users of the app already committed towards fighting their SUD or is the app a first step? What is the specific audience of the App? What research is considered outdated?

Thursday 6/15/2023

Researching articles to create opioid use disorder relapse survey:

  • [5]
    • Polysubstance use (using other drugs) increases risk of opioid relapse
    • "Relapse" is good keyword for research
  • [6]
    • Pandemic led to relapse - isolation as factor
  • [7]
    • medications good for avoiding opioid relapse


  • [8]
    • Socialization and meaningfulness prevent opioid relapse

Friday 6/16/2023

Research for SUD questionnaire

  • Established surveys - can these be used (intended for clinical settings, licensed practioners, and copyrighted)
  • [9]
  • [10]
  • [11]
  • [12]
  • [13]

Monday 6/19/2023

  • Watched Django tutorial videos on youtube
  • Will start programming next week

Tuesday 6/20/2023

  • Meeting with Sajad on software development for App
    • Will be done in django
    • SQl Database to store 3 different users - Admin, mentor, mentee
    • Create python virtual environment - anaconda

Wednesday 6/21/2023

  • Mentor meeting, group meeting - sharing progress, sharing question research
  • Django tutorials

Thursday 6/22/2023

  • Setting up python virtual environment
  • Anaconda
  • Work on users

Friday 6/23/2023

  • More tutorials/python environment trouble shooting

Monday 6/26/2023

  • Starting to work on presentation
  • Entering documents into bibliography

Tuesday 6/27/2023

  • Presentation finish/practice

Wednesday 6/28/2023

  • Presentations
  • Mentor meeting progress report

Friday 6/30/2023

  • Setting up github repo to python virtual environment
  • More VE troubleshooting

Tuesday 7/4/2023

  • Meeting with graduate student researcher
  • Anaconda terminal/vscode fix - launch vscode from anaconda

Wednesday 7/5/2023

  • Coding user package

Thursday 7/6/2023

  • more Coding on user packages

Friday 7/7/2023

  • Initial user package nearly complete
  • Bugs with message display
  • Login and registration page working
  • Need to create two different types of users

Monday 7/10/2023

  • Continuing work on user package

Tuesday 7/11/2023

  • Beginning survey functionality
  • Django tutorials
  • Meeting with graduate student researcher on webpage

Wednesday 7/12/2023

  • More coding for survey
  • Creating template for survey


Friday 7/14/2023

  • Survey coding and testing
  • Survey is difficult to implement


Monday 7/14/2023

  • Meeting on survey/webpage

Tuesday 7/17/2023

  • Research on Django webpage
  • More webpage coding

Wednesday 7/18/2023

  • Mentor meeting
  • Poster presentation

Thursday 7/19/2023

  • Survey coding