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== Summer Research Experience for Undergraduates == | == Summer Research Experience for Undergraduates == | ||

− | '''Data Science Across | + | |

+ | '''Research Experiences for Undergraduates (REU) Site : Data Science Across Disciplines''' | ||

+ | |||

+ | '''June 1 - August 7, 2020''' | ||

+ | |||

+ | '''Sponsored by National Science Foundation [https://www.nsf.gov/awardsearch/showAward?AWD_ID=1950826 Award#1950826]''' | ||

+ | |||

+ | '''Hosted by Marquette University—[https://www.marquette.edu/computer-science/ Department of Computer Science], Milwaukee, WI''' | ||

It is now well established that there is a critical need for data science researchers who can think creatively to solve problems in interdisciplinary fields such as healthcare, social science, and exercise science. Further, there exists scarcity of workforce and opportunities to train the next generation of researchers to tackle the problems in data science. To address the scarcity, this Data Science Across Disciplines Research Experiences for Undergraduates Site (DSAD-REU) will immerse undergraduate students in an interdisciplinary research-intensive training and mentoring program. | It is now well established that there is a critical need for data science researchers who can think creatively to solve problems in interdisciplinary fields such as healthcare, social science, and exercise science. Further, there exists scarcity of workforce and opportunities to train the next generation of researchers to tackle the problems in data science. To address the scarcity, this Data Science Across Disciplines Research Experiences for Undergraduates Site (DSAD-REU) will immerse undergraduate students in an interdisciplinary research-intensive training and mentoring program. | ||

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| [[Image:OBrien-axes.png|200px]] | | [[Image:OBrien-axes.png|200px]] | ||

| [[Image:Stochl-model.png|200px]] | | [[Image:Stochl-model.png|200px]] | ||

+ | |} | ||

+ | --> | ||

+ | |||

+ | Highlights | ||

+ | * Research themes/projects from different areas in data science such as core data science, exercise science, healthcare, social science and spatial analytics. | ||

+ | * 3-day mini boot camp on introduction to data science (first week of the program). | ||

+ | * Mentoring by researchers at Marquette University, Milwaukee, WI. | ||

+ | * Professional and leadership development opportunities. | ||

+ | * Poster presentation, technical report and publication opportunities. | ||

+ | |||

+ | ==== Data Science REU Summer 2020 Flyer ==== | ||

+ | |||

+ | Please find the Data Science REU Summer 2020 flyer in [[Media:DataScience-REU-Summer-2020Flyer.pdf| pdf ]] and | ||

+ | [[Media:Flyer-DataScience-REU-2020.jpg| jpg ]] formats. | ||

+ | |||

+ | <!-- | ||

+ | {| cellpadding="10" cellspacing="10" | ||

+ | | [[Image:Flyer-DataScience-REU-2020.jpg|400px]] | ||

|} | |} | ||

--> | --> | ||

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== Research Areas == | == Research Areas == | ||

− | + | Healthcare | |

+ | * [[Predict Risk of Opioid Use Disorder]]. Mentor [https://www.mscsnet.mu.edu/~praveen/ Dr. Praveen Madiraju] | ||

+ | * [[Machine Learning Models for Multi Robot Secure Coordination in a Healthcare Facility]]. Mentor [https://www.marquette.edu/computer-science/directory/debbie-perouli.php Dr. Debbie Perouli] | ||

+ | * [[Development of an anatomical atlas for stroke classification with Electrical Impedance Imaging for Deep Learning]]. Mentor [http://sjhamilton.weebly.com/ Dr. Sarah Hamilton] | ||

− | * [[ | + | Data Science Algorithms Ethics and Fairness: |

− | * [[ | + | * [[Ethical and Privacy Concerns with Suicide Risk Prediction Algorithms]]. Mentor [https://www.michaelzimmer.org/ Dr. Michael Zimmer] |

− | * [[ | + | * [[Studying Crisis Events on Social Media for non-WEIRD people]]. Mentor [https://www.shionguha.net/ Dr. Shion Guha] |

− | * [[ | + | * [[Deconstructing Spatial Clustering Algorithms To Explore Biases in Crime Analysis]]. Mentor [https://www.shionguha.net/ Dr. Shion Guha] |

− | + | * [[Using Bayesian Networks in Adaptive Online Skill Training]]. Mentor [https://www.marquette.edu/computer-science/directory/thomas-kaczmarek.php Dr. Tom Kaczmarek] | |

− | + | * [[Understanding Unanticipated, Social Consequences of Popular Algorithms]]. Mentor [https://www.shionguha.net/ Dr. Shion Guha] | |

− | + | ||

− | <!--* [[ | + | Exercise Science |

− | * [[ | + | * [[hrvMarquette: Heart Rate Variability Estimation]]. Mentor [http://www.mscs.mu.edu/~iq/ Dr. Iqbal Ahamed] |

− | * [[ | + | * [[parent and child physical activity and sleep in determining overweight and obese children’s behaviors]]. Mentor [https://www.marquette.edu/physical-therapy/directory/paula-papanek.php Dr. Paula Papanek] |

− | <!-- *[[ | + | |

+ | Social Science | ||

+ | * [[Ethical Algorithms for Placement Stability in the Foster Care]]. Mentor [https://www.shionguha.net/ Dr. Shion Guha] | ||

+ | * [[Association between crime, places, and neighborhood characteristics]]. Mentor [https://www.marquette.edu/social-cultural-sciences/directory/aleksandra-snowden.php Dr. Aleksandra Snowden] | ||

+ | |||

+ | Computer Science Education: | ||

+ | <!-- * [[Relational Thinking Strategies of Pre-Service Mathematics Teachers and Their Students]]. [[User:Ramm1576|Laura Ramm]] Mentor [http://www.marquette.edu/mscs/facstaff-magiera.shtml Dr. Marta Magiera] | ||

+ | * [[Looking Deeper at Inquiry-Based Instruction and Mathematics]]. Mentor [http://www.marquette.edu/mscs/facstaff-magiera.shtml Dr. Marta Magiera] | ||

+ | * [[Mathematical Argumentation in K-8]]. Mentor [http://www.marquette.edu/mscs/facstaff-magiera.shtml Dr. Marta Magiera] | ||

+ | --> | ||

+ | * [[Modeling the Spread of K-12 Computer Science in Wisconsin]]. Mentor [[User:Brylow|Dr. Dennis Brylow]] | ||

+ | |||

+ | * [[Self-Contained Solar Energy Experiment Kits]]. Mentors [[User:Brylow|Dr. Dennis Brylow]] and Dr. Lisa Bosman. | ||

+ | <!-- * [[Game Engine for Serious Educational Games]]. Mentors [http://www.marquette.edu/ctl/about/staff.shtml Dr. Shaun Longstreet] and [http://www.utdallas.edu/~kcooper/ Dr. Kendra Cooper].--> | ||

Bioinformatics and Computational Biology | Bioinformatics and Computational Biology | ||

− | * [[Discovering Significant Pathways of Gene Regulation]]. Mentor [ | + | * [[Discovering Significant Pathways of Gene Regulation]]. Mentor [https://biocomp.mscs.mu.edu/ Dr. Serdar Bozdag] |

− | * [[Inferring Cancer-Specific MicroRNA-gene Networks]]. Mentor [ | + | * [[Inferring Cancer-Specific MicroRNA-gene Networks]]. Mentor [https://biocomp.mscs.mu.edu/ Dr. Serdar Bozdag] |

− | * [[An Integrated Framework for Identifying Context-Specific Gene-Drug Interactions]]. Mentor [ | + | * [[An Integrated Framework for Identifying Context-Specific Gene-Drug Interactions]]. Mentor [https://biocomp.mscs.mu.edu/ Dr. Serdar Bozdag] |

− | * [[Reverse Engineering Gene Regulatory Networks by Integrating Multiple Types of High-Dimensional Biological Datasets]]. Mentor [ | + | * [[Reverse Engineering Gene Regulatory Networks by Integrating Multiple Types of High-Dimensional Biological Datasets]]. Mentor [https://biocomp.mscs.mu.edu/ Dr. Serdar Bozdag] |

− | * [[SUPREME: A Cancer Subtype Prediction Methodology by Integrating High-Dimensional Biological Datasets]]. Mentor [ | + | * [[SUPREME: A Cancer Subtype Prediction Methodology by Integrating High-Dimensional Biological Datasets]]. Mentor [https://biocomp.mscs.mu.edu/ Dr. Serdar Bozdag] |

+ | |||

+ | Spatial Analytics | ||

+ | * [[Finding hotspots in geo-spatial data using spatial statistics]]. Mentor [https://www.marquette.edu/computer-science/directory/satish-puri.php Dr. Satish Puri] | ||

High Performance Computing and Computational Science: | High Performance Computing and Computational Science: | ||

<!-- * [[Summarizing DNA Methylation Data at the Gene Level]]. Mentor [http://www.mscs.mu.edu/~bozdag/ Dr. Serdar Bozdag]--> | <!-- * [[Summarizing DNA Methylation Data at the Gene Level]]. Mentor [http://www.mscs.mu.edu/~bozdag/ Dr. Serdar Bozdag]--> | ||

* [[Deep Learning and Energy Forecasting]]. Mentors: GasDay Laboratory's [http://www.marquette.edu/electrical-computer-engineering/povinelli-richard.php Dr. Richard Povinelli], [http://www.marquette.edu/mscs/facstaff-corliss.shtml Dr. George Corliss], [http://www.marquette.edu/electrical-computer-engineering/brown-ronald.php Dr. Ron Brown], Tom Quinn | * [[Deep Learning and Energy Forecasting]]. Mentors: GasDay Laboratory's [http://www.marquette.edu/electrical-computer-engineering/povinelli-richard.php Dr. Richard Povinelli], [http://www.marquette.edu/mscs/facstaff-corliss.shtml Dr. George Corliss], [http://www.marquette.edu/electrical-computer-engineering/brown-ronald.php Dr. Ron Brown], Tom Quinn | ||

− | * [[Accelerating Geo-Spatial Computations Using High Performance Computing]]. Mentor [ | + | * [[Accelerating Geo-Spatial Computations Using High Performance Computing]]. Mentor [https://www.marquette.edu/computer-science/directory/satish-puri.php Dr. Satish Puri] |

Embedded, Mobile, and Ubiquitous Systems: | Embedded, Mobile, and Ubiquitous Systems: | ||

− | |||

<!-- * [[Seeing Beyond Visibility: Mobile Security]]. Mentor [http://www.marquette.edu/mscs/facstaff-ahamed.shtml Dr. Iqbal Ahamed] --> | <!-- * [[Seeing Beyond Visibility: Mobile Security]]. Mentor [http://www.marquette.edu/mscs/facstaff-ahamed.shtml Dr. Iqbal Ahamed] --> | ||

<!--* [[ADA Compliance Toolkit: Mobile Sensors]]. Mentor [http://www.marquette.edu/mscs/facstaff-ahamed.shtml Dr. Iqbal Ahamed] --> | <!--* [[ADA Compliance Toolkit: Mobile Sensors]]. Mentor [http://www.marquette.edu/mscs/facstaff-ahamed.shtml Dr. Iqbal Ahamed] --> | ||

* [[Embedded Xinu Operating System on Raspberry Pi]]. Mentor [[User:Brylow|Dr. Dennis Brylow]] | * [[Embedded Xinu Operating System on Raspberry Pi]]. Mentor [[User:Brylow|Dr. Dennis Brylow]] | ||

* [[Self-Contained Solar Energy Experiment Kits]]. Mentors [[User:Brylow|Dr. Dennis Brylow]] and Dr. Lisa Bosman. | * [[Self-Contained Solar Energy Experiment Kits]]. Mentors [[User:Brylow|Dr. Dennis Brylow]] and Dr. Lisa Bosman. | ||

− | <!--* [[H^3 App: Blackberry Highway Exit Helper for Hungry Travelers]]. Mentor [ | + | <!--* [[H^3 App: Blackberry Highway Exit Helper for Hungry Travelers]]. Mentor [https://www.mscsnet.mu.edu/~praveen/ Dr. Praveen Madiraju]--> |

− | * [[Personalizing Places of Interest Using Social Media Analysis]]. Mentor [ | + | * [[Personalizing Places of Interest Using Social Media Analysis]]. Mentor [https://www.mscsnet.mu.edu/~praveen/ Dr. Praveen Madiraju] |

− | * [[Complex Activity Recognition]]. Mentor [http://www. | + | * [[Complex Activity Recognition]]. Mentor [http://www.mscs.mu.edu/~iq/ Dr. Iqbal Ahamed] |

Security: | Security: | ||

+ | * [[Intrusion Detection in Swarm Robotics]]. Mentor [https://www.marquette.edu/computer-science/directory/debbie-perouli.php Dr. Debbie Perouli] | ||

+ | * [[Cyber Security Vulnerabilities in Avionics Networking]]. Mentor [https://www.marquette.edu/computer-science/directory/debbie-perouli.php Dr. Debbie Perouli] | ||

+ | * [[Networking in Electronic Financial Markets]]. Mentor [https://www.marquette.edu/computer-science/directory/debbie-perouli.php Dr. Debbie Perouli] | ||

− | * [[ | + | Applied Mathematical Modeling: |

− | * [[ | + | * [[Using Gaussian Stochastic Processes (GaSP) for Hazard Mapping]]. Mentor [http://www.marquette.edu/mscs/facstaff-factor.shtml Dr. Elaine Spiller] |

− | * [[ | + | * [[Risk Modeling for Pyroclastic Volcano Flows]]. Mentor [http://www.marquette.edu/mscs/facstaff-spiller.shtml Dr. Elaine Spiller] |

− | + | * [[Data Assimilation For Fluid Dynamic Models]]. Mentor [http://www.mscs.mu.edu/mscs/faculty/spiller.html Dr. Elaine Spiller] | |

− | + | <!--* [http://acm.mscs.mu.edu/wiki-reu/index.php/Natural_Gas_Forecasting GasDay-GasHour Inequality] Mentor [http://www.eng.mu.edu/corlissg/ Dr. George Corliss]--> | |

− | + | <!--* [[Minimizing Total Distance in Sudoku Number Entry]]. Mentor [http://www.marquette.edu/mscs/facstaff-factor.shtml Dr. Kim Factor]--> | |

− | * | + | <!--* [[Developing Methods to Study Complex Food Webs]]. Mentor [http://www.marquette.edu/mscs/facstaff-factor.shtml Dr. Kim Factor]--> |

− | + | <!--* [[Application of Competition Graphs and (1,2)-step Competition Graphs]]. Mentor [http://www.marquette.edu/mscs/facstaff-factor.shtml Dr. Kim Factor]--> | |

− | * [[ | + | * [[The Role of Leptin in Fat, Inflammation and the Immune System]]. Mentor: [http://www.mscs.mu.edu/~stevem/ Dr. Stephen Merrill] |

− | * [[ | + | * [[Characteristics of the (i,j)-Step Competition Graphs of Real Food Webs]]. Mentor [http://www.marquette.edu/mscs/facstaff-factor.shtml Dr. Kim Factor] |

− | + | <!-- *[[Linear Regression Model Trees for Electric Load Forecasting]]. Mentor: [http://www.marquette.edu/electrical-computer-engineering/povinelli-richard.php Dr. Richard Povinelli]--> | |

− | + | ||

− | + | ||

− | <!-- * [[ | + | |

− | * [[ | + | |

− | * [[ | + | |

− | + | ||

− | + | ||

− | <!-- * [[ | + | |

== Projects from Previous Years == | == Projects from Previous Years == |

## Latest revision as of 14:11, 3 February 2020

## Contents

# Welcome to the Marquette University Data Science REU Wiki

## Summer Research Experience for Undergraduates

**Research Experiences for Undergraduates (REU) Site : Data Science Across Disciplines**

**June 1 - August 7, 2020**

**Sponsored by National Science Foundation Award#1950826**

**Hosted by Marquette University—Department of Computer Science, Milwaukee, WI**

It is now well established that there is a critical need for data science researchers who can think creatively to solve problems in interdisciplinary fields such as healthcare, social science, and exercise science. Further, there exists scarcity of workforce and opportunities to train the next generation of researchers to tackle the problems in data science. To address the scarcity, this Data Science Across Disciplines Research Experiences for Undergraduates Site (DSAD-REU) will immerse undergraduate students in an interdisciplinary research-intensive training and mentoring program.

Our mentor research areas lie in all of these areas, as well as in how people learn to work in these fields, and how we prepare the next generation of students to explore data science.

Highlights

- Research themes/projects from different areas in data science such as core data science, exercise science, healthcare, social science and spatial analytics.
- 3-day mini boot camp on introduction to data science (first week of the program).
- Mentoring by researchers at Marquette University, Milwaukee, WI.
- Professional and leadership development opportunities.
- Poster presentation, technical report and publication opportunities.

#### Data Science REU Summer 2020 Flyer

Please find the Data Science REU Summer 2020 flyer in pdf and jpg formats.

## Application Process

Click here to learn about the Application Process.

# Projects

## Research Areas

Healthcare

- Predict Risk of Opioid Use Disorder. Mentor Dr. Praveen Madiraju
- Machine Learning Models for Multi Robot Secure Coordination in a Healthcare Facility. Mentor Dr. Debbie Perouli
- Development of an anatomical atlas for stroke classification with Electrical Impedance Imaging for Deep Learning. Mentor Dr. Sarah Hamilton

Data Science Algorithms Ethics and Fairness:

- Ethical and Privacy Concerns with Suicide Risk Prediction Algorithms. Mentor Dr. Michael Zimmer
- Studying Crisis Events on Social Media for non-WEIRD people. Mentor Dr. Shion Guha
- Deconstructing Spatial Clustering Algorithms To Explore Biases in Crime Analysis. Mentor Dr. Shion Guha
- Using Bayesian Networks in Adaptive Online Skill Training. Mentor Dr. Tom Kaczmarek
- Understanding Unanticipated, Social Consequences of Popular Algorithms. Mentor Dr. Shion Guha

Exercise Science

- hrvMarquette: Heart Rate Variability Estimation. Mentor Dr. Iqbal Ahamed
- parent and child physical activity and sleep in determining overweight and obese children’s behaviors. Mentor Dr. Paula Papanek

Social Science

- Ethical Algorithms for Placement Stability in the Foster Care. Mentor Dr. Shion Guha
- Association between crime, places, and neighborhood characteristics. Mentor Dr. Aleksandra Snowden

Computer Science Education:

- Self-Contained Solar Energy Experiment Kits. Mentors Dr. Dennis Brylow and Dr. Lisa Bosman.

Bioinformatics and Computational Biology

- Discovering Significant Pathways of Gene Regulation. Mentor Dr. Serdar Bozdag
- Inferring Cancer-Specific MicroRNA-gene Networks. Mentor Dr. Serdar Bozdag
- An Integrated Framework for Identifying Context-Specific Gene-Drug Interactions. Mentor Dr. Serdar Bozdag
- Reverse Engineering Gene Regulatory Networks by Integrating Multiple Types of High-Dimensional Biological Datasets. Mentor Dr. Serdar Bozdag
- SUPREME: A Cancer Subtype Prediction Methodology by Integrating High-Dimensional Biological Datasets. Mentor Dr. Serdar Bozdag

Spatial Analytics

High Performance Computing and Computational Science:

- Deep Learning and Energy Forecasting. Mentors: GasDay Laboratory's Dr. Richard Povinelli, Dr. George Corliss, Dr. Ron Brown, Tom Quinn
- Accelerating Geo-Spatial Computations Using High Performance Computing. Mentor Dr. Satish Puri

Embedded, Mobile, and Ubiquitous Systems:

- Embedded Xinu Operating System on Raspberry Pi. Mentor Dr. Dennis Brylow
- Self-Contained Solar Energy Experiment Kits. Mentors Dr. Dennis Brylow and Dr. Lisa Bosman.
- Personalizing Places of Interest Using Social Media Analysis. Mentor Dr. Praveen Madiraju
- Complex Activity Recognition. Mentor Dr. Iqbal Ahamed

Security:

- Intrusion Detection in Swarm Robotics. Mentor Dr. Debbie Perouli
- Cyber Security Vulnerabilities in Avionics Networking. Mentor Dr. Debbie Perouli
- Networking in Electronic Financial Markets. Mentor Dr. Debbie Perouli

Applied Mathematical Modeling:

- Using Gaussian Stochastic Processes (GaSP) for Hazard Mapping. Mentor Dr. Elaine Spiller
- Risk Modeling for Pyroclastic Volcano Flows. Mentor Dr. Elaine Spiller
- Data Assimilation For Fluid Dynamic Models. Mentor Dr. Elaine Spiller
- The Role of Leptin in Fat, Inflammation and the Immune System. Mentor: Dr. Stephen Merrill
- Characteristics of the (i,j)-Step Competition Graphs of Real Food Webs. Mentor Dr. Kim Factor

## Projects from Previous Years

All inquiries may be routed to the site coordinators, Dr. Praveen Madiraju or Dr. Dennis Brylow.